Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose epimerase family protein | AMED_RS17090 | Not Available | Negative | 3630285 - 3631376 | 39047.5 |
| helix-turn-helix domain-containing protein | AMED_RS17095 | Not Available | Negative | 3631493 - 3632740 | 45640.7 |
| mmpl family transporter | AMED_RS17100 | Not Available | Positive | 3633024 - 3635024 | 67176.6 |
| mfs transporter | AMED_RS17105 | Not Available | Positive | 3635021 - 3636406 | 46330.7 |
| fatty acyl-amp ligase | AMED_RS17110 | Not Available | Positive | 3636500 - 3638245 | 60384.6 |
| type i polyketide synthase | AMED_RS17115 | Not Available | Positive | 3638242 - 3644835 | 229330.0 |
| acyl-coa carboxylase subunit beta | AMED_RS17120 | Not Available | Positive | 3644835 - 3646412 | 56538.5 |
| alpha/beta hydrolase family protein | AMED_RS17125 | Not Available | Positive | 3646422 - 3647396 | 34886.4 |
| hypothetical protein | AMED_RS48670 | Not Available | Negative | 3647558 - 3647707 | 4967.83 |
| metal-dependent hydrolase | AMED_RS49430 | Not Available | Positive | 3647814 - 3647972 | 5628.47 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
