Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp pyrophosphokinase family protein | AMED_RS17040 | Not Available | Positive | 3618662 - 3619309 | 24477.5 |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | AMED_RS17045 | Not Available | Negative | 3619306 - 3619902 | 20746.5 |
| cytochrome p450 | AMED_RS17050 | Not Available | Negative | 3619935 - 3621239 | 46281.0 |
| duf998 domain-containing protein | AMED_RS17055 | Not Available | Negative | 3621298 - 3621933 | 21807.5 |
| m14 family zinc carboxypeptidase | AMED_RS17060 | Not Available | Positive | 3622146 - 3624614 | 87856.3 |
| lyse family translocator | AMED_RS17065 | Not Available | Negative | 3624681 - 3625544 | 28714.6 |
| dnaj domain-containing protein | AMED_RS17070 | Not Available | Negative | 3625654 - 3626745 | 39611.6 |
| amp-binding protein | AMED_RS17075 | Not Available | Negative | 3627180 - 3628802 | 57609.1 |
| dinb family protein | AMED_RS17080 | Not Available | Positive | 3629005 - 3629514 | 18790.4 |
| transporter substrate-binding domain-containing protein | AMED_RS17085 | Not Available | Negative | 3629519 - 3630235 | 24992.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
