Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 43 glycosylhydrolase | AMED_RS16990 | Not Available | Negative | 3606694 - 3609837 | 111314.0 |
| hypothetical protein | AMED_RS16995 | Not Available | Negative | 3609933 - 3610931 | 36309.8 |
| tetr/acrr family transcriptional regulator | AMED_RS17000 | Not Available | Negative | 3610928 - 3611509 | 20938.1 |
| hypothetical protein | AMED_RS17005 | Not Available | Positive | 3611571 - 3612566 | 36445.2 |
| alpha/beta fold hydrolase | AMED_RS17010 | Not Available | Negative | 3612557 - 3613282 | 25423.0 |
| hypothetical protein | AMED_RS17015 | Not Available | Positive | 3613470 - 3614264 | 28873.0 |
| alpha/beta hydrolase | AMED_RS17020 | Not Available | Positive | 3614300 - 3615619 | 44266.8 |
| llm class f420-dependent oxidoreductase | AMED_RS17025 | Not Available | Positive | 3615687 - 3616562 | 31487.6 |
| hypothetical protein | AMED_RS17030 | Not Available | Negative | 3616559 - 3616894 | 12580.1 |
| hypothetical protein | AMED_RS17035 | Not Available | Positive | 3617043 - 3618461 | 45850.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
