Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS16940 | Not Available | Negative | 3600004 - 3600321 | 10664.3 |
| srpbcc family protein | AMED_RS16945 | Not Available | Negative | 3600348 - 3600947 | 21053.1 |
| tetr/acrr family transcriptional regulator | AMED_RS16950 | Not Available | Positive | 3601041 - 3601679 | 23250.5 |
| trypsin-like serine protease | AMED_RS16955 | Not Available | Negative | 3601681 - 3602511 | 28006.2 |
| tetr/acrr family transcriptional regulator | AMED_RS16960 | Not Available | Negative | 3602623 - 3603264 | 23562.1 |
| cu044_5270 family protein | AMED_RS16965 | Not Available | Negative | 3603349 - 3604227 | 31384.2 |
| rna polymerase sigma factor | AMED_RS16970 | Not Available | Negative | 3604220 - 3604810 | 21567.6 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS16975 | Not Available | Negative | 3604912 - 3605394 | 17565.1 |
| gtp cyclohydrolase ii | AMED_RS16980 | Not Available | Positive | 3605474 - 3606088 | 21732.9 |
| hypothetical protein | AMED_RS16985 | Not Available | Negative | 3606210 - 3606548 | 12122.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
