Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | AMED_RS16900 | Not Available | Positive | 3588985 - 3590139 | 41807.2 |
| luxr c-terminal-related transcriptional regulator | AMED_RS16905 | Not Available | Negative | 3590515 - 3592809 | 81672.6 |
| duf2231 domain-containing protein | AMED_RS16910 | Not Available | Negative | 3593145 - 3593696 | 19121.2 |
| mfs transporter | AMED_RS16915 | Not Available | Positive | 3594025 - 3595287 | 42624.9 |
| ggdef domain-containing protein | AMED_RS16920 | Not Available | Positive | 3595537 - 3596814 | 45253.1 |
| laci family dna-binding transcriptional regulator | AMED_RS16925 | Not Available | Negative | 3596826 - 3597821 | 35579.5 |
| phytanoyl-coa dioxygenase family protein | AMED_RS16930 | Not Available | Positive | 3597904 - 3598746 | 30294.0 |
| hypothetical protein | AMED_RS47990 | Not Available | Positive | 3598782 - 3598922 | 4729.05 |
| hypothetical protein | AMED_RS49425 | Not Available | Negative | 3598971 - 3599093 | 4290.81 |
| zip family metal transporter | AMED_RS16935 | Not Available | Positive | 3599271 - 3600023 | 25071.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
