Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS16850 | Not Available | Negative | 3577303 - 3579699 | 79438.3 |
| gntr family transcriptional regulator | AMED_RS16855 | Not Available | Negative | 3580093 - 3580791 | 25384.5 |
| beta-n-acetylhexosaminidase | AMED_RS16860 | Not Available | Negative | 3580950 - 3582440 | 53778.8 |
| carbohydrate abc transporter permease | AMED_RS16865 | Not Available | Negative | 3582440 - 3583258 | 29403.0 |
| carbohydrate abc transporter permease | AMED_RS16870 | Not Available | Negative | 3583255 - 3584178 | 33136.8 |
| extracellular solute-binding protein | AMED_RS16875 | Not Available | Negative | 3584249 - 3585523 | 44204.1 |
| carbohydrate-binding protein | AMED_RS16880 | Not Available | Negative | 3585541 - 3586719 | 42033.5 |
| threonine/serine dehydratase | AMED_RS16885 | Not Available | Negative | 3586856 - 3587794 | 32574.4 |
| voc family protein | AMED_RS16890 | Not Available | Negative | 3587813 - 3588187 | 13047.5 |
| arsr family transcriptional regulator | AMED_RS16895 | Not Available | Negative | 3588184 - 3588906 | 26146.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
