Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin family protein | AMED_RS01595 | Not Available | Positive | 324257 - 325195 | 33584.4 |
| sam-dependent methyltransferase | AMED_RS01600 | Not Available | Negative | 325192 - 326034 | 31395.0 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS01605 | Not Available | Negative | 326072 - 326521 | 16485.8 |
| alpha/beta hydrolase | AMED_RS01610 | Not Available | Positive | 326677 - 327639 | 34311.5 |
| esterase family protein | AMED_RS01615 | Not Available | Positive | 327784 - 328992 | 43730.2 |
| hypothetical protein | AMED_RS01620 | Not Available | Negative | 328999 - 329895 | 31270.2 |
| duf4383 domain-containing protein | AMED_RS01625 | Not Available | Positive | 330086 - 330799 | 26000.4 |
| sco0930 family lipoprotein | AMED_RS01630 | Not Available | Negative | 330815 - 331813 | 33311.9 |
| adenylosuccinate lyase family protein | AMED_RS01635 | Not Available | Negative | 331916 - 333523 | 53721.9 |
| tmem175 family protein | AMED_RS01640 | Not Available | Positive | 333592 - 334233 | 23570.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
