Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinofuranosidase catalytic domain-containing protein | AMED_RS16750 | Not Available | Negative | 3551366 - 3552841 | 50928.9 |
| metal-dependent hydrolase | AMED_RS49670 | Not Available | Negative | 3552861 - 3553277 | 13701.8 |
| fadr/gntr family transcriptional regulator | AMED_RS16760 | Not Available | Positive | 3555626 - 3556369 | 27227.3 |
| ricin domain-containing protein | AMED_RS16765 | Not Available | Positive | 3556483 - 3557853 | 47490.1 |
| laci family dna-binding transcriptional regulator | AMED_RS16770 | Not Available | Positive | 3557858 - 3558886 | 36358.8 |
| arabinofuranosidase catalytic domain-containing protein | AMED_RS16775 | Not Available | Positive | 3558988 - 3560430 | 48614.3 |
| ricin domain-containing protein | AMED_RS16780 | Not Available | Positive | 3560866 - 3562710 | 65611.3 |
| oxygenase mpab family protein | AMED_RS16785 | Not Available | Negative | 3562732 - 3563913 | 42634.9 |
| tetr/acrr family transcriptional regulator | AMED_RS16790 | Not Available | Positive | 3564083 - 3565240 | 41138.5 |
| sige family rna polymerase sigma factor | AMED_RS16795 | Not Available | Positive | 3565290 - 3565808 | 19609.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
