Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | AMED_RS16700 | Not Available | Negative | 3535551 - 3536483 | 32604.5 |
| hypothetical protein | AMED_RS16705 | Not Available | Positive | 3536688 - 3537194 | 18863.5 |
| non-ribosomal peptide synthetase | AMED_RS16710 | Not Available | Positive | 3537198 - 3541400 | 150599.0 |
| family 43 glycosylhydrolase | AMED_RS16715 | Not Available | Negative | 3541366 - 3543351 | 71139.8 |
| glycoside hydrolase family 43 protein | AMED_RS16720 | Not Available | Negative | 3543376 - 3544737 | 49006.1 |
| endo-1,4-beta-xylanase | AMED_RS16725 | Not Available | Negative | 3544766 - 3546136 | 47716.1 |
| cellulose binding domain-containing protein | AMED_RS16730 | Not Available | Negative | 3546171 - 3547169 | 33590.9 |
| gh12 family glycosyl hydrolase domain-containing protein | AMED_RS16735 | Not Available | Negative | 3547353 - 3548102 | 26525.0 |
| sgnh/gdsl hydrolase family protein | AMED_RS16740 | Not Available | Negative | 3548258 - 3549343 | 37051.6 |
| alpha-l-fucosidase | AMED_RS16745 | Not Available | Negative | 3549367 - 3551340 | 71463.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
