Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | AMED_RS16650 | Not Available | Negative | 3526693 - 3528165 | 51089.8 |
| sialidase family protein | AMED_RS16655 | Not Available | Positive | 3528476 - 3530077 | 54690.0 |
| stas domain-containing protein | AMED_RS16660 | Not Available | Positive | 3530337 - 3530762 | 15209.3 |
| nad-dependent epimerase/dehydratase family protein | AMED_RS16665 | Not Available | Negative | 3530778 - 3531713 | 32223.6 |
| tetr/acrr family transcriptional regulator | AMED_RS16670 | Not Available | Positive | 3531828 - 3532523 | 25113.2 |
| hypothetical protein | AMED_RS16675 | Not Available | Negative | 3532592 - 3532918 | 12321.1 |
| prc-barrel domain-containing protein | AMED_RS16680 | Not Available | Negative | 3532905 - 3533294 | 13888.7 |
| nramp family divalent metal transporter | AMED_RS16685 | Not Available | Negative | 3533291 - 3534523 | 42740.4 |
| hypothetical protein | AMED_RS16690 | Not Available | Negative | 3534520 - 3534942 | 14489.2 |
| phosphatase pap2 family protein | AMED_RS16695 | Not Available | Positive | 3535043 - 3535579 | 18186.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
