Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS47985 | Not Available | Positive | 3516910 - 3517068 | 5536.03 |
| atp-binding protein | AMED_RS16605 | Not Available | Positive | 3517286 - 3518011 | 26469.1 |
| hypothetical protein | AMED_RS16610 | Not Available | Negative | 3518280 - 3519011 | 24790.4 |
| duf2188 domain-containing protein | AMED_RS16615 | Not Available | Negative | 3519093 - 3519323 | 8796.26 |
| 4-hydroxyphenyl-beta-ketoacyl-coa hydrolase | AMED_RS16620 | Not Available | Negative | 3519398 - 3520264 | 31455.4 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | AMED_RS16625 | Not Available | Negative | 3520279 - 3521265 | 34490.0 |
| acetoacetate--coa ligase | AMED_RS16630 | Not Available | Negative | 3521262 - 3523256 | 71394.1 |
| crotonase/enoyl-coa hydratase family protein | AMED_RS16635 | Not Available | Negative | 3523253 - 3524029 | 27467.3 |
| long-chain fatty acid--coa ligase | AMED_RS16640 | Not Available | Negative | 3524026 - 3525561 | 54629.1 |
| nad(p)-dependent alcohol dehydrogenase | AMED_RS16645 | Not Available | Negative | 3525573 - 3526676 | 37075.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
