Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | AMED_RS16555 | Not Available | Negative | 3507696 - 3508793 | 37598.9 |
| glycoside hydrolase family 43 protein | AMED_RS16560 | Not Available | Positive | 3508922 - 3509863 | 32566.4 |
| hypothetical protein | AMED_RS16565 | Not Available | Positive | 3509942 - 3510694 | 25095.7 |
| dna ligase d | AMED_RS16570 | Not Available | Negative | 3510697 - 3512709 | 73536.1 |
| tetr/acrr family transcriptional regulator | AMED_RS16575 | Not Available | Negative | 3512812 - 3513369 | 20341.0 |
| alpha/beta fold hydrolase | AMED_RS16580 | Not Available | Positive | 3513491 - 3514195 | 24459.8 |
| class i sam-dependent methyltransferase | AMED_RS16585 | Not Available | Positive | 3514283 - 3514900 | 22786.6 |
| had family hydrolase | AMED_RS16590 | Not Available | Negative | 3514893 - 3515645 | 26507.3 |
| hypothetical protein | AMED_RS16595 | Not Available | Positive | 3515644 - 3516288 | 22649.0 |
| duf4383 domain-containing protein | AMED_RS16600 | Not Available | Negative | 3516313 - 3516759 | 15467.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
