Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | AMED_RS16505 | Not Available | Negative | 3498810 - 3500144 | 47108.7 |
| duf3152 domain-containing protein | AMED_RS16510 | Not Available | Negative | 3500202 - 3500972 | 26833.9 |
| polysaccharide deacetylase family protein | AMED_RS16515 | Not Available | Negative | 3501481 - 3502488 | 35387.7 |
| hypothetical protein | AMED_RS16520 | Not Available | Positive | 3502651 - 3503628 | 34380.7 |
| hypothetical protein | AMED_RS16525 | Not Available | Negative | 3503773 - 3504243 | 15540.6 |
| hypothetical protein | AMED_RS16530 | Not Available | Negative | 3504561 - 3505166 | 20674.4 |
| wgxxgxxg family protein | AMED_RS16535 | Not Available | Negative | 3505289 - 3505672 | 12779.0 |
| hypothetical protein | AMED_RS16540 | Not Available | Positive | 3505948 - 3506289 | 12697.9 |
| hypothetical protein | AMED_RS16545 | Not Available | Positive | 3506590 - 3506967 | 12572.5 |
| hypothetical protein | AMED_RS16550 | Not Available | Positive | 3507290 - 3507643 | 11457.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
