Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS16405 | Not Available | Negative | 3481396 - 3481764 | 13328.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS16410 | Not Available | Negative | 3481761 - 3482297 | 19399.9 |
| phosphocholine-specific phospholipase c | AMED_RS16415 | Not Available | Positive | 3482475 - 3484493 | 73408.5 |
| duf1540 domain-containing protein | AMED_RS16420 | Not Available | Positive | 3484607 - 3484906 | 10180.8 |
| methyltransferase | AMED_RS48385 | Not Available | Negative | 3485081 - 3485545 | 15915.9 |
| hypothetical protein | AMED_RS48390 | Not Available | Positive | 3485715 - 3486128 | 14463.0 |
| helix-turn-helix domain-containing protein | AMED_RS16435 | Not Available | Positive | 3486128 - 3486742 | 22102.2 |
| fad-binding oxidoreductase | AMED_RS16440 | Not Available | Positive | 3486795 - 3487961 | 39937.6 |
| (2fe-2s)-binding protein | AMED_RS16445 | Not Available | Positive | 3487958 - 3488224 | 9106.87 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS16450 | Not Available | Positive | 3488221 - 3489504 | 44842.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
