Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgnh/gdsl hydrolase family protein | AMED_RS01545 | Not Available | Positive | 314780 - 315445 | 23574.8 |
| rna polymerase sigma factor | AMED_RS01550 | Not Available | Positive | 315862 - 316467 | 22483.0 |
| hypothetical protein | AMED_RS01555 | Not Available | Positive | 316464 - 316943 | 16982.3 |
| polysaccharide deacetylase family protein | AMED_RS01560 | Not Available | Negative | 316940 - 317689 | 27304.4 |
| srpbcc family protein | AMED_RS01565 | Not Available | Negative | 317804 - 318253 | 16441.7 |
| fusc family protein | AMED_RS01570 | Not Available | Positive | 318322 - 320289 | 68524.0 |
| antitoxin | AMED_RS01575 | Not Available | Positive | 320313 - 320516 | 7379.46 |
| prephenate dehydrogenase | AMED_RS01580 | Not Available | Negative | 320517 - 321494 | 33088.5 |
| nadph-dependent 2,4-dienoyl-coa reductase | AMED_RS01585 | Not Available | Negative | 321521 - 323533 | 71950.5 |
| padr family transcriptional regulator | AMED_RS01590 | Not Available | Negative | 323607 - 324152 | 20497.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
