Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heparinase ii/iii family protein | AMED_RS16250 | Not Available | Positive | 3446205 - 3448019 | 66567.8 |
| substrate-binding domain-containing protein | AMED_RS16255 | Not Available | Positive | 3448019 - 3449125 | 38696.6 |
| protein kinase domain-containing protein | AMED_RS16260 | Not Available | Negative | 3449192 - 3450043 | 29512.6 |
| laci family dna-binding transcriptional regulator | AMED_RS16265 | Not Available | Negative | 3450118 - 3451203 | 36863.1 |
| serine/threonine-protein kinase | AMED_RS16270 | Not Available | Negative | 3451329 - 3452720 | 47958.9 |
| serine/threonine-protein kinase | AMED_RS16275 | Not Available | Negative | 3452875 - 3454251 | 48452.6 |
| stas domain-containing protein | AMED_RS16280 | Not Available | Positive | 3454563 - 3454982 | 14719.1 |
| nrfd/psrc family molybdoenzyme membrane anchor subunit | AMED_RS16285 | Not Available | Negative | 3455020 - 3456033 | 35233.8 |
| 4fe-4s dicluster domain-containing protein | AMED_RS16290 | Not Available | Negative | 3456030 - 3457070 | 36779.4 |
| formate dehydrogenase | AMED_RS16295 | Not Available | Negative | 3457067 - 3460348 | 120716.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
