Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS47980 | Not Available | Negative | 3436019 - 3436183 | 5918.35 |
| bacteriophage spanin2 family protein | AMED_RS16205 | Not Available | Negative | 3436441 - 3436812 | 12155.4 |
| terc family protein | AMED_RS16210 | Not Available | Negative | 3436815 - 3437738 | 33594.9 |
| marr family transcriptional regulator | AMED_RS16215 | Not Available | Positive | 3437923 - 3438213 | 10651.9 |
| glycoside hydrolase family 13 protein | AMED_RS16220 | Not Available | Negative | 3438219 - 3439859 | 60356.5 |
| duf2264 domain-containing protein | AMED_RS16225 | Not Available | Negative | 3439920 - 3441929 | 71227.5 |
| hydroxyacid dehydrogenase | AMED_RS16230 | Not Available | Negative | 3441926 - 3442939 | 35576.0 |
| carbohydrate abc transporter permease | AMED_RS16235 | Not Available | Negative | 3442936 - 3443745 | 29054.2 |
| carbohydrate abc transporter permease | AMED_RS16240 | Not Available | Negative | 3443850 - 3444782 | 33011.9 |
| abc transporter substrate-binding protein | AMED_RS16245 | Not Available | Negative | 3444782 - 3446098 | 46996.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
