Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acp s-malonyltransferase | AMED_RS16055 | Not Available | Negative | 3401949 - 3405710 | 138213.0 |
| mfs transporter | AMED_RS16060 | Not Available | Positive | 3405981 - 3407177 | 40600.7 |
| m48 family metalloprotease | AMED_RS16065 | Not Available | Negative | 3407307 - 3408455 | 40229.3 |
| hamp domain-containing sensor histidine kinase | AMED_RS16070 | Not Available | Negative | 3408674 - 3410122 | 50404.4 |
| response regulator transcription factor | AMED_RS16075 | Not Available | Negative | 3410119 - 3410811 | 25148.4 |
| streptophobe family protein | AMED_RS16080 | Not Available | Negative | 3410808 - 3411938 | 35621.4 |
| abc transporter permease | AMED_RS16085 | Not Available | Negative | 3411938 - 3412702 | 26647.2 |
| abc transporter atp-binding protein | AMED_RS16090 | Not Available | Negative | 3412699 - 3413601 | 31502.3 |
| abc transporter substrate-binding protein | AMED_RS16095 | Not Available | Negative | 3413756 - 3415339 | 56071.0 |
| hypothetical protein | AMED_RS16100 | Not Available | Negative | 3415366 - 3417267 | 69026.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
