Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AMED_RS16005 | Not Available | Positive | 3390623 - 3392047 | 51276.6 |
| abc transporter permease subunit | AMED_RS16010 | Not Available | Positive | 3392044 - 3394053 | 71821.5 |
| ribonuclease activity regulator rraa | AMED_RS16015 | Not Available | Negative | 3394063 - 3394803 | 26407.4 |
| serine/threonine-protein kinase | AMED_RS16020 | Not Available | Positive | 3395006 - 3396211 | 41193.7 |
| btad domain-containing putative transcriptional regulator | AMED_RS16025 | Not Available | Negative | 3396264 - 3397088 | 31331.5 |
| ubia family prenyltransferase | AMED_RS16030 | Not Available | Positive | 3397500 - 3398399 | 30765.2 |
| sensor histidine kinase | AMED_RS16035 | Not Available | Positive | 3398413 - 3399477 | 38045.3 |
| response regulator transcription factor | AMED_RS16040 | Not Available | Positive | 3399474 - 3400133 | 24063.1 |
| hypothetical protein | AMED_RS16045 | Not Available | Positive | 3400231 - 3400410 | 6506.91 |
| hypothetical protein | AMED_RS16050 | Not Available | Negative | 3400470 - 3401945 | 54781.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
