Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | AMED_RS15955 | Not Available | Negative | 3379636 - 3380514 | 32011.6 |
| hypothetical protein | AMED_RS15960 | Not Available | Negative | 3380652 - 3382166 | 54596.0 |
| acyl-coa dehydrogenase family protein | AMED_RS15965 | Not Available | Negative | 3382311 - 3383417 | 37683.9 |
| acyl-coa dehydrogenase family protein | AMED_RS15970 | Not Available | Negative | 3383414 - 3384598 | 43480.7 |
| acyl-coa dehydrogenase family protein | AMED_RS15975 | Not Available | Negative | 3384595 - 3385818 | 45089.9 |
| phosphotransferase family protein | AMED_RS15980 | Not Available | Negative | 3385819 - 3386844 | 37025.0 |
| maoc family dehydratase | AMED_RS15985 | Not Available | Negative | 3386971 - 3387423 | 16317.5 |
| 3-oxoacyl-acp reductase fabg | AMED_RS15990 | Not Available | Negative | 3387428 - 3388189 | 26058.1 |
| mandelate racemase/muconate lactonizing enzyme family protein | AMED_RS15995 | Not Available | Negative | 3388364 - 3389521 | 41771.9 |
| fadr/gntr family transcriptional regulator | AMED_RS16000 | Not Available | Positive | 3389596 - 3390342 | 27965.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
