Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3618 domain-containing protein | AMED_RS15860 | Not Available | Negative | 3361243 - 3361854 | 21290.7 |
| phage holin family protein | AMED_RS15865 | Not Available | Negative | 3361851 - 3362279 | 14934.2 |
| hypothetical protein | AMED_RS15870 | Not Available | Negative | 3362279 - 3363232 | 31847.7 |
| merr family transcriptional regulator | AMED_RS15875 | Not Available | Negative | 3363311 - 3364138 | 28784.9 |
| srpbcc family protein | AMED_RS15880 | Not Available | Negative | 3364147 - 3364611 | 17453.0 |
| stas domain-containing protein | AMED_RS15885 | Not Available | Positive | 3364726 - 3365106 | 12852.7 |
| nucleotidyltransferase family protein | AMED_RS15890 | Not Available | Positive | 3365137 - 3365946 | 29014.7 |
| metallophosphoesterase | AMED_RS15895 | Not Available | Positive | 3365943 - 3366674 | 25746.7 |
| sgnh/gdsl hydrolase family protein | AMED_RS15900 | Not Available | Negative | 3366718 - 3367326 | 20479.6 |
| zinc-binding dehydrogenase | AMED_RS15905 | Not Available | Positive | 3367459 - 3368421 | 32380.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
