Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | AMED_RS01495 | Not Available | Negative | 307166 - 307597 | 14777.5 |
| tetr/acrr family transcriptional regulator | AMED_RS01500 | Not Available | Positive | 307693 - 308265 | 20007.9 |
| mfs transporter | AMED_RS01505 | Not Available | Negative | 308207 - 309433 | 43454.8 |
| hypothetical protein | AMED_RS48215 | Not Available | Positive | 309574 - 309906 | 10971.9 |
| hypothetical protein | AMED_RS01515 | Not Available | Positive | 309945 - 310412 | 15692.7 |
| abc transporter permease | AMED_RS01520 | Not Available | Negative | 310409 - 312043 | 56365.7 |
| abc transporter atp-binding protein | AMED_RS01525 | Not Available | Negative | 312040 - 312936 | 32484.0 |
| gbsr/marr family transcriptional regulator | AMED_RS01530 | Not Available | Positive | 313030 - 313518 | 18773.4 |
| tetr/acrr family transcriptional regulator | AMED_RS01535 | Not Available | Negative | 313515 - 314078 | 20290.4 |
| nad(p)-dependent oxidoreductase | AMED_RS01540 | Not Available | Positive | 314162 - 314770 | 21379.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
