Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enolase c-terminal domain-like protein | AMED_RS15710 | Not Available | Positive | 3291350 - 3292663 | 47411.6 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS15715 | Not Available | Positive | 3292660 - 3293433 | 26196.2 |
| sugar abc transporter substrate-binding protein | AMED_RS15720 | Not Available | Positive | 3293430 - 3294497 | 37416.6 |
| sugar abc transporter atp-binding protein | AMED_RS15725 | Not Available | Positive | 3294523 - 3296022 | 53242.9 |
| abc transporter permease | AMED_RS15730 | Not Available | Positive | 3296015 - 3297040 | 35108.2 |
| aldo/keto reductase | AMED_RS15735 | Not Available | Positive | 3297040 - 3297897 | 30379.1 |
| alpha-l-fucosidase | AMED_RS15740 | Not Available | Positive | 3297948 - 3300197 | 79827.4 |
| fadr/gntr family transcriptional regulator | AMED_RS15745 | Not Available | Negative | 3300244 - 3300957 | 25587.7 |
| nuclear transport factor 2 family protein | AMED_RS15750 | Not Available | Positive | 3301133 - 3301552 | 15416.8 |
| tetr/acrr family transcriptional regulator | AMED_RS15755 | Not Available | Positive | 3301549 - 3302100 | 19356.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
