Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glxa family transcriptional regulator | AMED_RS15660 | Not Available | Positive | 3282695 - 3283636 | 33735.4 |
| aldo/keto reductase | AMED_RS15665 | Not Available | Negative | 3283596 - 3284654 | 37865.4 |
| voc family protein | AMED_RS15670 | Not Available | Negative | 3284724 - 3285188 | 16346.1 |
| yafy family protein | AMED_RS15675 | Not Available | Positive | 3285301 - 3286284 | 35263.4 |
| atp-dependent sacrificial sulfur transferase lare | AMED_RS15680 | Not Available | Negative | 3286304 - 3287092 | 27308.4 |
| metal-dependent hydrolase | AMED_RS15685 | Not Available | Negative | 3287118 - 3287525 | 13933.9 |
| nickel pincer cofactor biosynthesis protein larb | AMED_RS15690 | Not Available | Negative | 3287522 - 3288193 | 22580.3 |
| nickel-dependent lactate racemase | AMED_RS15695 | Not Available | Negative | 3288190 - 3289470 | 45212.1 |
| amidohydrolase | AMED_RS15700 | Not Available | Negative | 3289467 - 3290309 | 30052.8 |
| fumarylacetoacetate hydrolase family protein | AMED_RS15705 | Not Available | Negative | 3290306 - 3291157 | 30376.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
