Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdsl-type esterase/lipase family protein | AMED_RS15610 | Not Available | Positive | 3272588 - 3273826 | 42660.3 |
| hypothetical protein | AMED_RS15615 | Not Available | Negative | 3273841 - 3273999 | 5454.51 |
| laci family dna-binding transcriptional regulator | AMED_RS15620 | Not Available | Negative | 3274117 - 3275130 | 35695.7 |
| abc transporter substrate-binding protein | AMED_RS15625 | Not Available | Positive | 3275294 - 3276541 | 42191.5 |
| carbohydrate abc transporter permease | AMED_RS15630 | Not Available | Positive | 3276550 - 3277494 | 34495.3 |
| carbohydrate abc transporter permease | AMED_RS15635 | Not Available | Positive | 3277491 - 3278300 | 28680.4 |
| mgh1-like glycoside hydrolase domain-containing protein | AMED_RS15640 | Not Available | Positive | 3278327 - 3280033 | 60945.9 |
| gh12 family glycosyl hydrolase domain-containing protein | AMED_RS15645 | Not Available | Positive | 3280203 - 3280895 | 24378.0 |
| tetr/acrr family transcriptional regulator | AMED_RS15650 | Not Available | Negative | 3281053 - 3281652 | 21177.5 |
| aldo/keto reductase | AMED_RS15655 | Not Available | Positive | 3281738 - 3282634 | 31308.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
