Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent alcohol dehydrogenase | AMED_RS15510 | Not Available | Negative | 3253636 - 3254775 | 41002.3 |
| pp2c family protein-serine/threonine phosphatase | AMED_RS15515 | Not Available | Negative | 3254844 - 3256034 | 42715.0 |
| spoiie family protein phosphatase | AMED_RS15520 | Not Available | Negative | 3256034 - 3257089 | 35857.6 |
| atp-binding protein | AMED_RS15525 | Not Available | Negative | 3257086 - 3257508 | 14703.4 |
| stas domain-containing protein | AMED_RS15530 | Not Available | Negative | 3257498 - 3257881 | 13677.0 |
| stas domain-containing protein | AMED_RS15535 | Not Available | Negative | 3257878 - 3258741 | 30921.3 |
| marr family transcriptional regulator | AMED_RS15540 | Not Available | Negative | 3258816 - 3259241 | 15529.7 |
| pp2c family protein-serine/threonine phosphatase | AMED_RS15545 | Not Available | Positive | 3259427 - 3260644 | 43567.4 |
| hypothetical protein | AMED_RS15550 | Not Available | Negative | 3260658 - 3260948 | 10190.2 |
| hsp20/alpha crystallin family protein | AMED_RS15555 | Not Available | Negative | 3260959 - 3261396 | 16181.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
