Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylesterase/lipase family protein | AMED_RS15460 | Not Available | Negative | 3243059 - 3244489 | 49854.0 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | AMED_RS15465 | Not Available | Negative | 3244689 - 3246863 | 75826.7 |
| xanthine dehydrogenase family protein subunit m | AMED_RS15470 | Not Available | Negative | 3246860 - 3247822 | 33621.4 |
| (2fe-2s)-binding protein | AMED_RS15475 | Not Available | Negative | 3247809 - 3248261 | 15826.0 |
| tetr/acrr family transcriptional regulator | AMED_RS15480 | Not Available | Positive | 3248457 - 3249032 | 20607.8 |
| hypothetical protein | AMED_RS15485 | Not Available | Negative | 3249029 - 3249388 | 13155.8 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | AMED_RS15490 | Not Available | Negative | 3249677 - 3251161 | 52297.0 |
| hypothetical protein | AMED_RS15495 | Not Available | Negative | 3251203 - 3252072 | 30594.8 |
| gntr family transcriptional regulator | AMED_RS15500 | Not Available | Positive | 3252210 - 3252986 | 28418.0 |
| hypothetical protein | AMED_RS15505 | Not Available | Negative | 3253047 - 3253622 | 21675.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
