Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | AMED_RS15410 | Not Available | Negative | 3235517 - 3236322 | 27046.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS15415 | Not Available | Negative | 3236319 - 3236759 | 15589.9 |
| helix-turn-helix transcriptional regulator | AMED_RS15420 | Not Available | Negative | 3236831 - 3237154 | 11600.0 |
| nad(p)-dependent alcohol dehydrogenase | AMED_RS15425 | Not Available | Positive | 3237237 - 3238226 | 35054.8 |
| pspa-associated protein pspab | AMED_RS15430 | Not Available | Positive | 3238447 - 3239001 | 20017.3 |
| voc family protein | AMED_RS15435 | Not Available | Positive | 3239076 - 3239483 | 14665.0 |
| hypothetical protein | AMED_RS15440 | Not Available | Positive | 3239565 - 3240194 | 21276.2 |
| hypothetical protein | AMED_RS15445 | Not Available | Negative | 3240113 - 3240742 | 23422.8 |
| gnat family n-acetyltransferase | AMED_RS15450 | Not Available | Positive | 3240809 - 3241498 | 24532.6 |
| sensor histidine kinase | AMED_RS15455 | Not Available | Negative | 3241652 - 3242929 | 44364.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
