Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | AMED_RS15365 | Not Available | Positive | 3227474 - 3228319 | 29555.1 |
| pirin family protein | AMED_RS15370 | Not Available | Negative | 3228293 - 3229297 | 35613.3 |
| hypothetical protein | AMED_RS48650 | Not Available | Negative | 3229648 - 3229866 | 7157.58 |
| metal-dependent hydrolase | AMED_RS48655 | Not Available | Negative | 3230013 - 3230258 | 8584.19 |
| single-stranded dna-binding protein | AMED_RS15380 | Not Available | Positive | 3230384 - 3230818 | 15614.3 |
| hypothetical protein | AMED_RS15385 | Not Available | Positive | 3230990 - 3231280 | 9931.92 |
| zinc-ribbon domain-containing protein | AMED_RS15390 | Not Available | Negative | 3231598 - 3231990 | 14425.3 |
| nitroreductase/quinone reductase family protein | AMED_RS15395 | Not Available | Positive | 3232158 - 3232583 | 15710.0 |
| transglycosylase domain-containing protein | AMED_RS15400 | Not Available | Negative | 3232585 - 3234699 | 72609.4 |
| abc transporter permease | AMED_RS15405 | Not Available | Negative | 3234736 - 3235557 | 28788.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
