Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3d domain-containing protein | AMED_RS01445 | Not Available | Positive | 300211 - 300954 | 25749.3 |
| nitroreductase family protein | AMED_RS01450 | Not Available | Negative | 301136 - 301774 | 23500.2 |
| aldo/keto reductase | AMED_RS01455 | Not Available | Negative | 301793 - 302770 | 35217.5 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS01460 | Not Available | Positive | 302813 - 303313 | 18444.2 |
| atp-binding protein | AMED_RS01465 | Not Available | Negative | 303327 - 303746 | 15229.4 |
| sigb/sigf/sigg family rna polymerase sigma factor | AMED_RS01470 | Not Available | Negative | 303809 - 304588 | 28506.9 |
| anti-sigma factor | AMED_RS01475 | Not Available | Negative | 304585 - 305001 | 14918.5 |
| whib family transcriptional regulator | AMED_RS01480 | Not Available | Positive | 305165 - 305473 | 11699.0 |
| stas domain-containing protein | AMED_RS01485 | Not Available | Positive | 305692 - 306045 | 12246.4 |
| metal-dependent hydrolase | AMED_RS01490 | Not Available | Positive | 306105 - 306893 | 27626.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
