Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zf-hc2 domain-containing protein | AMED_RS15215 | Not Available | Negative | 3199891 - 3200577 | 23635.4 |
| sigma-70 family rna polymerase sigma factor | AMED_RS15220 | Not Available | Positive | 3200635 - 3201186 | 20065.8 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | AMED_RS15225 | Not Available | Positive | 3201351 - 3203597 | 79376.3 |
| (2fe-2s)-binding protein | AMED_RS15230 | Not Available | Positive | 3203609 - 3204067 | 16387.7 |
| cdar family transcriptional regulator | AMED_RS15235 | Not Available | Positive | 3204203 - 3205426 | 43965.1 |
| cyclic-phosphate processing receiver domain-containing protein | AMED_RS15240 | Not Available | Negative | 3205423 - 3205698 | 10164.9 |
| tigr03564 family f420-dependent llm class oxidoreductase | AMED_RS15245 | Not Available | Negative | 3205695 - 3206564 | 30245.1 |
| tetr/acrr family transcriptional regulator | AMED_RS15250 | Not Available | Negative | 3206582 - 3207247 | 24636.6 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS15255 | Not Available | Positive | 3207403 - 3208263 | 30468.2 |
| l-glyceraldehyde 3-phosphate reductase | AMED_RS15260 | Not Available | Negative | 3208311 - 3209339 | 37596.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
