Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | AMED_RS15165 | Not Available | Negative | 3193095 - 3193454 | 12907.5 |
| paai family thioesterase | AMED_RS15170 | Not Available | Positive | 3193579 - 3194079 | 17396.8 |
| nuclear transport factor 2 family protein | AMED_RS15175 | Not Available | Negative | 3194069 - 3194389 | 11533.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS15180 | Not Available | Negative | 3194440 - 3194916 | 17312.9 |
| pyridoxamine 5'-phosphate oxidase family protein | AMED_RS15185 | Not Available | Positive | 3194915 - 3195376 | 17309.6 |
| rok family protein | AMED_RS15190 | Not Available | Negative | 3195373 - 3196572 | 40768.9 |
| duf427 domain-containing protein | AMED_RS15195 | Not Available | Positive | 3196673 - 3197413 | 27451.5 |
| carotenoid oxygenase family protein | AMED_RS15200 | Not Available | Negative | 3197419 - 3198699 | 47344.6 |
| hypothetical protein | AMED_RS15205 | Not Available | Negative | 3198696 - 3199256 | 20263.0 |
| padr family transcriptional regulator | AMED_RS15210 | Not Available | Positive | 3199347 - 3199859 | 19222.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
