Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | AMED_RS15015 | Not Available | Positive | 3154618 - 3155886 | 45839.4 |
| duf1365 domain-containing protein | AMED_RS15020 | Not Available | Positive | 3155880 - 3156614 | 27626.6 |
| ecf rna polymerase sigma factor sigk | AMED_RS15025 | Not Available | Positive | 3156607 - 3157221 | 23009.4 |
| anti-sigma factor domain-containing protein | AMED_RS15030 | Not Available | Positive | 3157233 - 3157988 | 25612.8 |
| cell division protein ftsz | AMED_RS15035 | Not Available | Positive | 3158231 - 3159535 | 43878.9 |
| peptidoglycan editing factor pgef | AMED_RS15040 | Not Available | Positive | 3159610 - 3160314 | 24465.2 |
| yggs family pyridoxal phosphate-dependent enzyme | AMED_RS15045 | Not Available | Positive | 3160311 - 3161024 | 24980.6 |
| cell division protein sepf | AMED_RS15050 | Not Available | Positive | 3161123 - 3161725 | 22448.2 |
| yggt family protein | AMED_RS15055 | Not Available | Positive | 3161841 - 3162116 | 10374.2 |
| diviva domain-containing protein | AMED_RS15060 | Not Available | Positive | 3162169 - 3163023 | 31208.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
