Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | AMED_RS14965 | Not Available | Negative | 3146701 - 3147594 | 30484.1 |
| 4fe-4s binding protein | AMED_RS14970 | Not Available | Positive | 3148203 - 3148724 | 18905.4 |
| tetr/acrr family transcriptional regulator | AMED_RS14975 | Not Available | Negative | 3148731 - 3149300 | 20267.4 |
| tetr/acrr family transcriptional regulator | AMED_RS14980 | Not Available | Negative | 3149376 - 3150050 | 24588.0 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS14985 | Not Available | Positive | 3150136 - 3150939 | 29300.6 |
| osmc family peroxiredoxin | AMED_RS14990 | Not Available | Negative | 3151017 - 3151451 | 14501.9 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS14995 | Not Available | Negative | 3151492 - 3151935 | 16182.5 |
| dinb family protein | AMED_RS15000 | Not Available | Positive | 3152013 - 3152519 | 18888.1 |
| duf1295 domain-containing protein | AMED_RS15005 | Not Available | Negative | 3152506 - 3153267 | 28176.9 |
| cyclopropane-fatty-acyl-phospholipid synthase family protein | AMED_RS15010 | Not Available | Negative | 3153270 - 3154535 | 46369.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
