Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AMED_RS14920 | Not Available | Negative | 3137539 - 3138189 | 23288.4 |
| sensor histidine kinase | AMED_RS14925 | Not Available | Negative | 3138206 - 3139387 | 40246.0 |
| hypothetical protein | AMED_RS14930 | Not Available | Positive | 3139523 - 3139999 | 17899.2 |
| maue/doxx family redox-associated membrane protein | AMED_RS14935 | Not Available | Negative | 3140055 - 3140582 | 17453.4 |
| hypothetical protein | AMED_RS14940 | Not Available | Positive | 3140730 - 3141422 | 24718.5 |
| hypothetical protein | AMED_RS14945 | Not Available | Positive | 3141419 - 3141913 | 17135.0 |
| hypothetical protein | AMED_RS14950 | Not Available | Positive | 3141910 - 3142476 | 20580.1 |
| hypothetical protein | AMED_RS47975 | Not Available | Positive | 3142473 - 3142646 | 5746.16 |
| hypothetical protein | AMED_RS14955 | Not Available | Positive | 3142665 - 3143228 | 19354.9 |
| s8 family serine peptidase | AMED_RS14960 | Not Available | Negative | 3143203 - 3146493 | 113090.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
