Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chat domain-containing protein | AMED_RS14870 | Not Available | Negative | 3123109 - 3126657 | 126904.0 |
| hypothetical protein | AMED_RS14875 | Not Available | Negative | 3126757 - 3130050 | 117570.0 |
| alpha/beta fold hydrolase | AMED_RS14880 | Not Available | Negative | 3130167 - 3131357 | 41878.4 |
| tetr/acrr family transcriptional regulator | AMED_RS14885 | Not Available | Positive | 3131443 - 3132021 | 20393.3 |
| hypothetical protein | AMED_RS14890 | Not Available | Positive | 3132147 - 3132965 | 29121.7 |
| hypothetical protein | AMED_RS14895 | Not Available | Negative | 3132962 - 3133390 | 14140.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS14900 | Not Available | Positive | 3133455 - 3133943 | 17633.6 |
| hypothetical protein | AMED_RS14905 | Not Available | Negative | 3133967 - 3135160 | 42723.9 |
| alpha/beta fold hydrolase | AMED_RS14910 | Not Available | Negative | 3135251 - 3136933 | 59056.3 |
| rdd family protein | AMED_RS14915 | Not Available | Positive | 3137092 - 3137658 | 20769.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
