Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS14820 | Not Available | Negative | 3112573 - 3112932 | 13331.0 |
| hypothetical protein | AMED_RS14825 | Not Available | Negative | 3113067 - 3113444 | 12581.9 |
| wd40 repeat domain-containing protein | AMED_RS14830 | Not Available | Positive | 3113687 - 3117538 | 136646.0 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS14835 | Not Available | Negative | 3117622 - 3118842 | 43009.3 |
| hypothetical protein | AMED_RS14840 | Not Available | Positive | 3118978 - 3119124 | 5395.36 |
| hypothetical protein | AMED_RS14845 | Not Available | Positive | 3119215 - 3119619 | 14529.3 |
| fad-dependent monooxygenase | AMED_RS14850 | Not Available | Negative | 3119645 - 3121084 | 51667.6 |
| lrp/asnc family transcriptional regulator | AMED_RS14855 | Not Available | Positive | 3121200 - 3122165 | 34639.6 |
| duf6338 family protein | AMED_RS14860 | Not Available | Positive | 3122216 - 3122908 | 25226.6 |
| hypothetical protein | AMED_RS14865 | Not Available | Positive | 3122871 - 3123065 | 6428.21 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
