Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 290202 - 290291 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 290333 - 290406 | Not Available |
| hypothetical protein | AMED_RS01405 | Not Available | Positive | 290624 - 291868 | 44651.7 |
| glycosyl hydrolase family 18 protein | AMED_RS01410 | Not Available | Positive | 292077 - 293705 | 56599.5 |
| cellulose binding domain-containing protein | AMED_RS01415 | Not Available | Positive | 293702 - 295048 | 46371.9 |
| aspartate aminotransferase family protein | AMED_RS01420 | Not Available | Negative | 295163 - 296464 | 46548.9 |
| lysr family transcriptional regulator | AMED_RS01425 | Not Available | Positive | 296552 - 297469 | 33215.4 |
| tetratricopeptide repeat protein | AMED_RS01430 | Not Available | Negative | 297543 - 298586 | 38377.0 |
| hnh endonuclease family protein | AMED_RS01435 | Not Available | Positive | 298765 - 299436 | 24781.1 |
| alpha/beta fold hydrolase | AMED_RS01440 | Not Available | Positive | 299447 - 300085 | 22846.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
