Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AMED_RS14770 | Not Available | Negative | 3101643 - 3102257 | 22445.1 |
| beta-ketoacyl-acp synthase iii | AMED_RS14775 | Not Available | Negative | 3102381 - 3103319 | 32059.3 |
| tetr/acrr family transcriptional regulator | AMED_RS14780 | Not Available | Positive | 3103380 - 3103973 | 21756.5 |
| non-reducing end alpha-l-arabinofuranosidase family hydrolase | AMED_RS14785 | Not Available | Negative | 3104050 - 3105531 | 52487.9 |
| metal-dependent hydrolase | AMED_RS14790 | Not Available | Positive | 3105861 - 3106241 | 13280.4 |
| nacht domain-containing ntpase | AMED_RS14795 | Not Available | Negative | 3106441 - 3109482 | 112260.0 |
| hypothetical protein | AMED_RS14800 | Not Available | Positive | 3109609 - 3110346 | 26134.4 |
| nitroreductase/quinone reductase family protein | AMED_RS14805 | Not Available | Negative | 3110375 - 3110845 | 17221.8 |
| tetr family transcriptional regulator | AMED_RS14810 | Not Available | Positive | 3110927 - 3111541 | 21830.9 |
| merr family transcriptional regulator | AMED_RS14815 | Not Available | Positive | 3111576 - 3112562 | 37103.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
