Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS14720 | Not Available | Positive | 3091802 - 3092059 | 8521.28 |
| murein biosynthesis integral membrane protein murj | AMED_RS14725 | Not Available | Positive | 3092167 - 3093927 | 61681.9 |
| hypothetical protein | AMED_RS14730 | Not Available | Positive | 3094127 - 3094633 | 17821.4 |
| chitinase | AMED_RS14735 | Not Available | Negative | 3094707 - 3095657 | 33190.1 |
| diguanylate cyclase | AMED_RS14740 | Not Available | Positive | 3095988 - 3097268 | 44078.3 |
| hypothetical protein | AMED_RS14745 | Not Available | Positive | 3097588 - 3097857 | 9244.2 |
| isopenicillin n synthase family oxygenase | AMED_RS14750 | Not Available | Negative | 3097861 - 3098823 | 35338.5 |
| nucleoside deaminase | AMED_RS14755 | Not Available | Negative | 3098906 - 3099364 | 16459.6 |
| metal-dependent hydrolase | AMED_RS14760 | Not Available | Positive | 3099476 - 3100431 | 35491.0 |
| metal-dependent hydrolase | AMED_RS14765 | Not Available | Negative | 3100513 - 3101603 | 38790.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
