Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS14670 | Not Available | Negative | 3077966 - 3078298 | 11620.9 |
| nacht domain-containing ntpase | AMED_RS14675 | Not Available | Positive | 3078386 - 3081769 | 122246.0 |
| tigr03084 family metal-binding protein | AMED_RS14680 | Not Available | Positive | 3081898 - 3082689 | 28425.3 |
| acyclic terpene utilization atua family protein | AMED_RS14685 | Not Available | Positive | 3082686 - 3084374 | 59369.7 |
| acyl-coa dehydrogenase family protein | AMED_RS14690 | Not Available | Positive | 3084371 - 3085519 | 41600.4 |
| acyl-coa carboxylase subunit beta | AMED_RS14695 | Not Available | Positive | 3085516 - 3087114 | 56937.1 |
| biotin carboxylase n-terminal domain-containing protein | AMED_RS14700 | Not Available | Positive | 3087122 - 3089071 | 68758.5 |
| acyl-coa dehydrogenase family protein | AMED_RS14705 | Not Available | Positive | 3089068 - 3090234 | 41359.5 |
| nad(p)-dependent oxidoreductase | AMED_RS14710 | Not Available | Positive | 3090243 - 3091079 | 29452.3 |
| tetr/acrr family transcriptional regulator | AMED_RS14715 | Not Available | Positive | 3091076 - 3091678 | 21993.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
