Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | AMED_RS14620 | Not Available | Positive | 3066204 - 3066758 | 19942.5 |
| peroxiredoxin | AMED_RS14625 | Not Available | Negative | 3066724 - 3067185 | 16803.0 |
| diguanylate cyclase domain-containing protein | AMED_RS14630 | Not Available | Negative | 3067474 - 3069291 | 64846.5 |
| cytochrome p450 | AMED_RS14635 | Not Available | Negative | 3069529 - 3070989 | 54293.6 |
| pyridoxamine 5'-phosphate oxidase family protein | AMED_RS14640 | Not Available | Positive | 3071346 - 3071750 | 15040.0 |
| nudix hydrolase | AMED_RS14645 | Not Available | Positive | 3071768 - 3072226 | 16413.8 |
| ribonucleotide-diphosphate reductase subunit beta | AMED_RS14650 | Not Available | Negative | 3072275 - 3073348 | 41265.1 |
| ribonucleoside-diphosphate reductase subunit alpha | AMED_RS14655 | Not Available | Negative | 3073365 - 3076283 | 107477.0 |
| acetoacetate decarboxylase family protein | AMED_RS14660 | Not Available | Negative | 3076520 - 3077104 | 20838.0 |
| enoyl-coa hydratase-related protein | AMED_RS14665 | Not Available | Negative | 3077101 - 3077940 | 30132.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
