Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AMED_RS14570 | Not Available | Positive | 3055534 - 3055743 | 7506.13 |
| glycosyltransferase 87 family protein | AMED_RS14575 | Not Available | Negative | 3055730 - 3057112 | 48030.5 |
| llm class flavin-dependent oxidoreductase | AMED_RS14580 | Not Available | Negative | 3057146 - 3058000 | 30621.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS14585 | Not Available | Positive | 3058072 - 3058503 | 15538.9 |
| abc transporter atp-binding protein | AMED_RS14590 | Not Available | Positive | 3058602 - 3060473 | 67013.6 |
| serine hydrolase domain-containing protein | AMED_RS14595 | Not Available | Negative | 3060618 - 3061778 | 40709.9 |
| sis domain-containing protein | AMED_RS14600 | Not Available | Negative | 3061902 - 3062630 | 25276.0 |
| alpha/beta hydrolase | AMED_RS14605 | Not Available | Positive | 3062759 - 3063514 | 26681.1 |
| cyclopropane-fatty-acyl-phospholipid synthase family protein | AMED_RS14610 | Not Available | Positive | 3063610 - 3064866 | 46589.2 |
| lcp family protein | AMED_RS14615 | Not Available | Positive | 3064963 - 3066165 | 42951.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
