Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS14520 | Not Available | Negative | 3043151 - 3043546 | 14541.5 |
| hypothetical protein | AMED_RS14525 | Not Available | Negative | 3043588 - 3044214 | 22928.4 |
| ggdef domain-containing protein | AMED_RS14530 | Not Available | Negative | 3044539 - 3046212 | 58204.1 |
| helix-turn-helix transcriptional regulator | AMED_RS14535 | Not Available | Positive | 3046339 - 3046686 | 12971.5 |
| srpbcc family protein | AMED_RS14540 | Not Available | Positive | 3046683 - 3047318 | 22928.8 |
| pasta domain-containing protein | AMED_RS14545 | Not Available | Negative | 3047315 - 3047665 | 11976.0 |
| deoxyguanosinetriphosphate triphosphohydrolase family protein | AMED_RS14550 | Not Available | Positive | 3047739 - 3049301 | 55899.9 |
| s8 family serine peptidase | AMED_RS14555 | Not Available | Positive | 3049993 - 3052881 | 96841.8 |
| acvlrf1 family peptidyl-trna hydrolase | AMED_RS14560 | Not Available | Positive | 3052942 - 3053589 | 23092.6 |
| abc-f family atp-binding cassette domain-containing protein | AMED_RS14565 | Not Available | Positive | 3053727 - 3055355 | 58331.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
