Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase | AMED_RS14420 | Not Available | Positive | 3024988 - 3026277 | 45466.2 |
| fe-s cluster assembly sulfur transfer protein sufu | AMED_RS14425 | Not Available | Positive | 3026274 - 3026723 | 16224.1 |
| metal-sulfur cluster assembly factor | AMED_RS14430 | Not Available | Positive | 3026720 - 3027121 | 14526.9 |
| duf4184 family protein | AMED_RS14435 | Not Available | Negative | 3027129 - 3027905 | 27790.2 |
| ynfa family protein | AMED_RS14440 | Not Available | Positive | 3027923 - 3028255 | 11575.4 |
| signal peptidase i | AMED_RS14445 | Not Available | Positive | 3028285 - 3029064 | 27492.3 |
| aarf/abc1/ubib kinase family protein | AMED_RS14450 | Not Available | Negative | 3028988 - 3030934 | 68876.5 |
| snapalysin family zinc-dependent metalloprotease | AMED_RS14455 | Not Available | Positive | 3031118 - 3031657 | 18371.6 |
| sensor histidine kinase | AMED_RS14460 | Not Available | Positive | 3031845 - 3033071 | 42936.4 |
| response regulator transcription factor | AMED_RS14465 | Not Available | Positive | 3033068 - 3033721 | 22885.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
