Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp synthase iii | AMED_RS01345 | Not Available | Positive | 279128 - 280117 | 33940.3 |
| adenylate/guanylate cyclase domain-containing protein | AMED_RS01350 | Not Available | Negative | 280105 - 281598 | 51143.3 |
| polyketide synthase | AMED_RS01355 | Not Available | Negative | 281635 - 282048 | 15621.0 |
| fadr/gntr family transcriptional regulator | AMED_RS01360 | Not Available | Negative | 282185 - 282874 | 25277.1 |
| hypothetical protein | AMED_RS01365 | Not Available | Positive | 282918 - 283559 | 22191.8 |
| sulfite exporter taue/safe family protein | AMED_RS01370 | Not Available | Positive | 283621 - 284394 | 27017.0 |
| histidinol-phosphate transaminase | AMED_RS01375 | Not Available | Negative | 284466 - 285542 | 38736.4 |
| dienelactone hydrolase family protein | AMED_RS01380 | Not Available | Positive | 285689 - 286318 | 22083.9 |
| acetoacetate--coa ligase | AMED_RS01385 | Not Available | Positive | 286404 - 288383 | 71264.8 |
| phosphatidylglycerol lysyltransferase domain-containing protein | AMED_RS01390 | Not Available | Positive | 288421 - 290136 | 62125.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
