Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | AMED_RS14275 | Not Available | Negative | 2993702 - 2994901 | 43394.5 |
| 6-phosphogluconolactonase | AMED_RS14280 | Not Available | Negative | 2995293 - 2996072 | 27235.2 |
| glucose-6-phosphate dehydrogenase assembly protein opca | AMED_RS14285 | Not Available | Negative | 2996069 - 2997139 | 37034.9 |
| glucose-6-phosphate dehydrogenase | AMED_RS14290 | Not Available | Negative | 2997136 - 2998659 | 56665.3 |
| glucose-6-phosphate isomerase | AMED_RS14295 | Not Available | Negative | 2998656 - 3000278 | 55749.4 |
| transaldolase | AMED_RS14300 | Not Available | Negative | 3000287 - 3001399 | 40315.2 |
| transketolase | AMED_RS14305 | Not Available | Negative | 3001414 - 3003516 | 75361.4 |
| heme o synthase | AMED_RS14310 | Not Available | Positive | 3003800 - 3004780 | 35507.1 |
| hypothetical protein | AMED_RS14315 | Not Available | Positive | 3005017 - 3005376 | 12099.6 |
| type vii secretion target | AMED_RS14320 | Not Available | Positive | 3005449 - 3005820 | 12870.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
