Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03620 family f420-dependent llm class oxidoreductase | AMED_RS14225 | Not Available | Positive | 2985340 - 2986125 | 27712.1 |
| nuclear transport factor 2 family protein | AMED_RS14230 | Not Available | Negative | 2986122 - 2986604 | 17525.4 |
| helix-turn-helix transcriptional regulator | AMED_RS14235 | Not Available | Positive | 2986640 - 2986984 | 12377.0 |
| lyse family translocator | AMED_RS14240 | Not Available | Negative | 2986965 - 2987609 | 21863.3 |
| winged helix dna-binding domain-containing protein | AMED_RS14245 | Not Available | Positive | 2987681 - 2988862 | 42531.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | AMED_RS14250 | Not Available | Positive | 2989291 - 2990295 | 35096.8 |
| phosphoglycerate kinase | AMED_RS14255 | Not Available | Positive | 2990300 - 2991514 | 41860.0 |
| triose-phosphate isomerase | AMED_RS14260 | Not Available | Positive | 2991514 - 2992299 | 27832.4 |
| preprotein translocase subunit secg | AMED_RS14265 | Not Available | Positive | 2992427 - 2992657 | 7876.14 |
| rna polymerase-binding protein rbpa | AMED_RS14270 | Not Available | Positive | 2992765 - 2993109 | 12583.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
