Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | AMED_RS14175 | Not Available | Negative | 2971004 - 2971864 | 32982.1 |
| tetr/acrr family transcriptional regulator | AMED_RS14180 | Not Available | Positive | 2971935 - 2972543 | 21875.2 |
| hypothetical protein | AMED_RS14185 | Not Available | Negative | 2972571 - 2973689 | 40596.4 |
| hypothetical protein | AMED_RS14190 | Not Available | Positive | 2973853 - 2974221 | 13679.3 |
| pqq-dependent sugar dehydrogenase | AMED_RS14195 | Not Available | Negative | 2974288 - 2976921 | 90163.0 |
| coproporphyrinogen iii oxidase | AMED_RS14200 | Not Available | Negative | 2977171 - 2978004 | 30723.0 |
| ppox class f420-dependent oxidoreductase | AMED_RS14205 | Not Available | Negative | 2978043 - 2978480 | 16207.3 |
| hypothetical protein | AMED_RS14210 | Not Available | Positive | 2978567 - 2980024 | 53408.4 |
| hypothetical protein | AMED_RS14215 | Not Available | Positive | 2980024 - 2980824 | 28595.8 |
| hypothetical protein | AMED_RS14220 | Not Available | Positive | 2980836 - 2985302 | 160741.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
