Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | AMED_RS14125 | Not Available | Positive | 2960953 - 2962281 | 47400.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | AMED_RS14130 | Not Available | Positive | 2962278 - 2962784 | 17848.1 |
| ph domain-containing protein | AMED_RS14135 | Not Available | Positive | 2962781 - 2963224 | 16000.9 |
| exodeoxyribonuclease iii | AMED_RS14140 | Not Available | Negative | 2963231 - 2964007 | 28265.2 |
| trypsin-like serine protease | AMED_RS14145 | Not Available | Negative | 2964081 - 2964803 | 23974.9 |
| excinuclease abc subunit uvrc | AMED_RS14150 | Not Available | Positive | 2964995 - 2966950 | 72107.8 |
| rnase adapter rapz | AMED_RS14155 | Not Available | Positive | 2966993 - 2967850 | 31399.8 |
| uridine diphosphate-n-acetylglucosamine-binding protein yvck | AMED_RS14160 | Not Available | Positive | 2967852 - 2968844 | 34007.5 |
| dna-binding protein whia | AMED_RS14165 | Not Available | Positive | 2968844 - 2969836 | 35485.7 |
| glucosyl-3-phosphoglycerate synthase | AMED_RS14170 | Not Available | Positive | 2969996 - 2971000 | 35931.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
